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dluecking avatar dluecking commented on June 20, 2024

Update:
Set keras to version 2.9.0, now I run into another error:

(dvf) [12:47:37] ~/.../results/11_SRF/contigs $ python ~/bin/DeepVirFinder/dvf.py -i virome.contigs.filtered.fasta -o dvf -l 2000 -c 8
Traceback (most recent call last):
  File "/home/dlueckin/bin/DeepVirFinder/dvf.py", line 52, in <module>
    import h5py, multiprocessing
ModuleNotFoundError: No module named 'h5py'

But I guess thats not on your side, since someone else has a similar issue unrelated to dvf (https://stackoverflow.com/questions/70856913/i-cannot-import-h5py-although-installed).

Still, the mamba/conda install is not working on my system, maybe someone can update the required dependencies.

Thanks and all the best!

from deepvirfinder.

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