Error in match_barcodes about pinpoint

[jgraving]

I'm unable to reproduce this behavior. Can you provide more details as well as a minimal working example reproducing the error? I'm also unsure how this is possible since the values of index provided by the NearestNeighbors class can only ever be <len(id_list).

[pnuehrenberg]

Video and barcodes:
https://we.tl/2SlUuZyOZN

We tracked with following parameters:

from pinpoint import Tracker, VideoReader

videopath = ''
videofile = 'marc_calliurus_20180227_162022.mp4'

tracker = Tracker(source=videopath+videofile,
block_size=201,
offset=-15,
distance_threshold=20,
area_range=(50, 800),
tolerance=0.1,
channel='gray',
resize=2)

tracker.load_dict('3x3.pkl')

tracker.track('calliurus_tracks_270218_162022.h5',batch_size=200, n_jobs=-1)

[jgraving]

The latest commit should fix this bug for custom generated dictionaries. Unfortunately any custom dictionaries generated with the bug are not usable.