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Jing Wan's Projects

deepstarr icon deepstarr

Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Drosophila melanogaster S2 cells

ggplot2 icon ggplot2

An implementation of the Grammar of Graphics in R

hic-pro icon hic-pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

karyoploter icon karyoploter

karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

matchedfilter icon matchedfilter

Prediction of Active Enhancers and Promoters in a Cell type specific manner using shape matching of histone and/or DNase-I hypersensitivity profiles

pymc4c icon pymc4c

A python based approach to processing MC4C data

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