Install the package and use:
devtools::install_github("jinyung/loci2migrate")Or just source the function:
source('https://raw.githubusercontent.com/jinyung/loci2migrate/master/R/loci2migrate.R')loci2migrate(locipath, poppath, filename)Where,
locipath |
(char) path to .loci to be converted |
poppath |
(char) path to file contains population info * |
filename |
(char) path for output file |
* This should be a tab delimited file with the first column as individuals' labels and the second column as the population label. E.g.
Ind1 Pop1
Ind2 Pop1
Ind3 Pop1
Ind4 Pop2
Ind5 Pop2
Ind6 Pop2
Ind7 Pop3
Ind8 Pop3
Ind9 Pop3
something looks like this:
Wong, J. Y. (2019) loci2migrate version 0.0.2. doi: 10.5281/zenodo.2583679
or bibtex:
@misc{loci2migrate,
doi = {10.5281/zenodo.2583679},
year = 2019,
author = {JY Wong},
title = {loci2migrate v0.0.2},
url = {https://github.com/jinyung/loci2migrate}
}
(Change the version number for which you use)
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