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Johnny Israeli's Projects

cs273b-project icon cs273b-project

Genome-scale high-resolution mapping of activating and repressive nucleotides in regulatory regions

deep-review icon deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

deepbind icon deepbind

Training and testing of DeepBind models.

deepsea icon deepsea

Training and testing of DeepSEA models.

dragonn icon dragonn

Deep Neural Networks Tutorial for Regulatory Genomics

gaussiancharges icon gaussiancharges

An adaption of PME that models nonbonded interactions using gaussian charges instead of point charges.

octopus icon octopus

Bayesian haplotype-based mutation calling

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