jmonlong Goto Github PK
Name: Jean Monlong
Type: User
Company: INSERM U1220 IRSD
Bio: INSERM Researcher (CRCN)
Twitter: jmonlong
Location: Tououse, France
Name: Jean Monlong
Type: User
Company: INSERM U1220 IRSD
Bio: INSERM Researcher (CRCN)
Twitter: jmonlong
Location: Tououse, France
Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls
Official home of genome aligner based upon notion of Cactus graphs
WDL variant calling workflows
WDL workflows for the NIH CARD long-read sequencing project
Docker container for BayesTyper
bcftools and bgzip/tabix
Docker image with BWA and samtools
Docker container for Delly
Freebayes and samtools
Docker container for GraphAligner
Docker container for GaphTyper2
Docker container for guppy
igv-webapp + http-server to use IGV on HPC or a cloud instance
Docker container for liftOver and the chain file hg19 -> GRCh38
Docker for Liger2LiGer (rlorigro/Liger2LiGer)
Docker image for forked version of Manta that works with ABRA2-realigned BAMs
Container with tools to parse and merge VCFs containing SV calls from vg.
Docker container to run pgge (https://github.com/pangenome/pgge)
Docker container for Phasebook: https://github.com/phasebook/phasebook
Docker container for RepeatMasker
Container for seqwish
Container for smoothxg
Container to run Snakemake pipeline using singularityin its rules.
Docker container for SVTyper
Custom Jupyter notebook with more tools
Custom image to use Rstudio on Terra with more packages installed
Docker container to run https://github.com/ChaissonLab/TT-Mars
Container with vg and a few other tools (snakemake, bcftools, awscli)
Docker container with vg and a few other tools
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.