joshuak94 Goto Github PK
Name: Joshua Kim
Type: User
Company: @seqan
Bio: Current Doctoral candidate at the Max Planck Institute for Molecular Genetics.
Location: Berlin, Germany
Joshua Kim's Projects
bai_parser
A small BAI parser to test seqan3.
bamintervaltree
biocpp-io
The Biological Input-Output library
bleacher
A tool for ChIP-seq normalization.
compgen2021capstone
ebi_journal
edgepy
A Python implementation of edgeR for differential expression analysis.
evalsvcallers
Evaluate the performances (precision and recall) of structural variation (SV) callers
genmap
GenMap - Fast and Exact Computation of Genome Mappability
igenvar
The official repository for the iGenVar project.
lila_tournament_filter
mousecontrol2
A reimplentation of the original MouseControl plugin made by Noitidart
neural-chessboard
♔ An Extremely Efficient Chess-board Detection for Non-trivial Photos ♔
opentrons
Software for writing protocols and running them on Opentrons robots
seqan
SeqAn's official repository.
seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
seqancoverage
Generate coverage from a BAM/SAM file.
singleworkflow
Single-cell RNA-seq data workflow
skiplist
skiplist-1
sviper
Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.
vaquita-lr
Identification of structural variations
wiggletools
Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency
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