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Juan Pascual-Anaya's Projects

macs icon macs

MACS -- Model-based Analysis of ChIP-Seq

ngs13_diffexp_pipeline icon ngs13_diffexp_pipeline

Pipeline to map with TopHat2, compare annotation files with cuffcompare and do differential expression analysis

pacbio-protocols4bas.h5 icon pacbio-protocols4bas.h5

Modified protocol from Huddleston et al. 2014 Genome Res. to work with .bas.h5 files produced by older chemistries

vista2gff icon vista2gff

Perl script that formats the coordinates of a VISTA analysis result into GFF format.

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