jpickard1 Goto Github PK

504gitexercise

Code to demonstrate simple use of github

ballbearings

This repository contains data and code to recreate classification results for fault detection in ball bearings. The data comes from the Case Western Reserve Bearing Data Center

digitallibrary

A dataset of documents and questions to evaluate the Bioinformatics Retrieval Augmented Data (BRAD) Chatbot

disaster_tweet_classification

Many disasters and emergencies are reported via social media. This repository stores data and code designed to classify tweets based on whether or not they report real disasters.

disease_modeling

This repository contains code developed as part of a research project with the King Lab at the University of Michigan.

git-practice

This repo is for practicing using git to manage larger projects on multiple branches

hardwiredgenome-python

HardwiredGenome Project (v2)

hypergraph-analysis-toolbox

The Hypergraph Analysis Toolbox (HAT) contains a series of methods for investigating multi-way interactions and nucleus architecture.

jpickard1.github.io

Website

kronecker-products-tensors-and-hypergraphs

Kronecker Products of Tensors and Hypergraphs: Structure and Dynamics

learn-fortran-mpi

This repo is to help me learn Fortran

llama-coursera-class

Codes associated with https://www.coursera.org/learn/llama-for-python-programmers

magic

MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.

main

mathematics-of-data

This repository contains code, data, and associated materials for a project to describe and teach concepts related to the mathematics behind data and data science

mathworks-project

Biopipeline Designer Project

medium

This repo will store code and data related to my medium publications.

midasbiomedbootcamp

observability-of-hypergraphs

Software for "Observability of Hypergraphs"

pickard-shared

A repository for shared code among my lab group

pickard.io

Personal Website

python-control

The Python Control Systems Library is a Python module that implements basic operations for analysis and design of feedback control systems.

quickmath

This repo contains some quick math

rag-dev

A LLM powered chatbot for bioinformatics

scanpy

Single-cell analysis in Python. Scales to >1M cells.

snake

sphinx-rtd-tutorial

A tutorial on how to use Sphinx