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Hi, I'm Juan José 👋

I'm a biologist aspiring to become a bioinformatician. Developing as a Pythonista and Rustacean.

🧐 Interests:

  • Genomics & Epigenomics 🧬
  • Machine learning 🤖
  • Back-End 💾

🧰 Tools:

  • 🧑🏻‍💻 Programming lenguages

  • 🛠️ Other tools


Juan José Picón Cossio's Projects

internship_uo icon internship_uo

This repository is for all my work done during my 1 year internship at University of Oregon.

kraken2 icon kraken2

This contains a modify version of the k2 file to download using https protocol libraries and taxonomy

maus icon maus

Metagenomic Analysis workflow at UniSeqs

mitnanex icon mitnanex

MItocondrial NAnopore reads EXtractor De novo from WGS. It also assembles the mitogenome.

nanoplot icon nanoplot

Plotting scripts for long read sequencing data

sra-metadata-extractor icon sra-metadata-extractor

Tool intended to get SRA run accessions and its metadata for every Bioproject presented in a csv file.

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