jykr Goto Github PK
Name: Jayoung Kim Ryu
Type: User
Company: Harvard Medical School, @pinellolab
Bio: Bioinformatics & Integrative Genomics Ph.D. candidate at Harvard & MGH
Twitter: JayoungR
Location: Boston, MA
Blog: jykr.github.io
Name: Jayoung Kim Ryu
Type: User
Company: Harvard Medical School, @pinellolab
Bio: Bioinformatics & Integrative Genomics Ph.D. candidate at Harvard & MGH
Twitter: JayoungR
Location: Boston, MA
Blog: jykr.github.io
Annotated data matrices.
A benchmark of batch-effect correction methods for single-cell RNA sequencing data
Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The name of the connection can be used to reestablish the connection later or to terminate it.
Creating climate change visualizations
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
Negative binomial maximum likelihood estimate implementation in Python using L-BFGS-B
Config files for my GitHub profile.
Personal Blog using Hydeout
Experimental source code for MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout)
Structural variant and indel caller for mapped sequencing data
A python module of handy tools and functions, mainly for ML and Kaggle
Multimodal Data (.h5mu) implementation for Python
Analysis Framework for Pooled CRISPR Genome Editing Screens
POT : Python Optimal Transport
Deep universal probabilistic programming with Python and PyTorch
Generate embeddings from large-scale graph-structured data.
Graph Neural Network Library for PyTorch
Tutorials for SIMBA (https://github.com/pinellolab/simba)
Some useful scripts to process structural variant calls
Vectorizers for a range of different data types
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.