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aif360

A comprehensive set of fairness metrics for datasets and machine learning models, explanations for these metrics, and algorithms to mitigate bias in datasets and models.

bike_share_ride_report

A Shiny dashboard for visualizing Bike Share Toronto trip data 🚲

bio_utilities

Collection of miscellaneous bioinformatics-related scripts

bioconda-recipes

Conda recipes for the bioconda channel.

colour_bar_builder

A Shiny app for creating custom colour bars 🌈

goanalysis

Script for running Gene Ontology enrichment analysis in R. Works for human genes only.

gopro_renamer

Python tool to change naming of chaptered video files from GoPro Hero 3GoPro HERO3 to HERO 2018 cameras

kcha.github.io

polyester

Bioconductor package "polyester", devel version. RNA-seq read simulator.

prezto

The configuration framework for Zsh

psiplot

R package for plotting PSI values generated from vast-tools

psiplotter-app

A Shiny app for visualizing PSI values of alternative spilcing events from VAST-TOOLS

pyblatpsl

A Python module for the PSL format from the BLAT alignment program

pyconserve

pysimplegui

Launched in 2018. It's 2022 and PySimpleGUI is actively developed & supported. Create complex windows simply. Supports tkinter, Qt, WxPython, Remi (in browser). Create GUI applications trivially with a full set of widgets. Multi-Window applications are also simple. 3.4 to 3.11 supported. 325+ Demo programs & Cookbook for rapid start. Extensive docu

roku

Method for identification tissue-specific genes

seqcos

A .NET application for performing quality control of high-throughput sequencing reads. My intern project at Microsoft Research (2011).

unix_utilities

My collection of miscellaneous Unix-related utility scripts. This is also used as a sandbox for experimenting with different coding platforms.