kids-first Goto Github PK
Name: Kids First Data Resource Center
Type: Organization
Bio: Working Together to Put Kids First
Blog: http://kidsfirstdrc.org
Name: Kids First Data Resource Center
Type: Organization
Bio: Working Together to Put Kids First
Blog: http://kidsfirstdrc.org
๐ง Data Portal Generation
The AWS Glue Data Catalog is a fully managed, Apache Hive Metastore compatible, metadata repository. Customers can use the Data Catalog as a central repository to store structural and operational metadata for their data. AWS Glue provides out-of-box integration with Amazon EMR that enables customers to use the AWS Glue Data Catalog as an external Hive Metastore. This is an open-source implementation of the Apache Hive Metastore client on Amazon EMR clusters that uses the AWS Glue Data Catalog as an external Hive Metastore. It serves as a reference implementation for building a Hive Metastore-compatible client that connects to the AWS Glue Data Catalog. It may be ported to other Hive Metastore-compatible platforms such as other Hadoop and Apache Spark distributions
CFDE Cloud Workspace Partnership Pilot
Definition and DDLs for the OMOP Common Data Model (CDM)
Forked from MSKCC, this is used to push KF published studies to MSKCC's cBioPortal to increase visibility and collaboration in pediatric reserarch
General DevOps Requests for KidsFirst DevOps team
:white_check_mark: An OAuth 2.0 Authorization service that supports multiple OpenID Connect Identity Providers
๐ง express middleware for validating the ego jwt
๐ง User Interface for Ego Authorization Service
:microscope: Alignment workflow for Kids-First DRC
Variant caller annotation repository. Outputs from variant germline and somatic callers need annotation to add context to calls. ARCHIVED 11 January 2024 as work derived from these efforts and in production will by in another repo
This repo contains commonly share annotation tools. Meant to be generally used as a git submodule for other variant calling workflows to centralize and simplify code development and maintainance.
:factory: a data-model aware GraphQL API that sits above an Elasticsearch cluster
๐ Nano service for creating study buckets in S3
:file_cabinet: Primary API for interacting with the Kids First data
๐ฅ FHIR Data Service for Kids First
๐ Generate reports based on queries built using the Kids First Portal
๐คนโโ๏ธ Coordinate multiple services to synchronize data releases
This service provides an endpoint to query the member elasticsearch database. Results are returned based on a provided query string and some low / high limit for the number of results desired.
๐ Powers investigator-driven data staging. Backend for Data Tracker app
๐ Elasticsearch API Server for Kids First Portal
arranger admin api for the Kids First project
This is a repo template that closely adheres to the general organizational template with a few modifications to for the BIXU team
This repo houses scripts and guidelines on publishing a CWL app as a public app on Cavtica
Kids First Tools built on top of Sevenbridges Python API
Repository of scripts used to convert dataservice metadata and DRC processed data into cbio portal loading format.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.