kimpenn Goto Github PK
Name: Kim Lab
Type: Organization
Bio: Lab repos
Blog: kim.bio.upenn.edu
Kim Lab's Projects
argos
R/shiny interface for interactive of data wrangling in TIPeR Project
chex-analysis
This repository contains code for CHEX-seq data analysis.
chex-seq
This is the computational pipeline for CHEX-seq data
glo-db
Genomic Locus Operations Database
jc-0324
kidneycellexplorer
microscope-utility
Automation workflow for Kim Lab Microscope.
nofold
Motif finder for RNA secondary structures
pess
Full-scale protein fold recognition using 1NN
pic-snatac
A package for Paired Insertion Counting for snATAC-seq data.
pivot
Platform for Interactive analysis and Visualization Of Transcriptomics data
resistant-fit-norm-bibe-2020
Supporting material and reproducing the experiments of the paper "Resistant Fit Regression Normalization for Single-cell RNA-seq Data" of BIBE 2020
smito-analysis
This repository contains code for SMITO data analysis
smito-pipeline
Single-MITOchondrion (SMITO) SNV Pipeline
subspace
theia
R/shiny interface for Kim Lab RNA-seq Pipeline Quality Control
verse
A versatile and efficient RNA-Seq read counting tool
viscello
Viscello for Visualization of Single Cell Data
viscello.celegans
VisCello for C.elegans embryogenesis
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