kizbaolin Goto Github PK
Name: Baolin Zhang
Type: User
Company: Kunming Institute of Zoology, Chinese Academy of Sciences
Baolin Zhang's Projects
able
ABLE - Approximate Blockwise Likelihood Estimation
admixture_graph
Module for analysing admixture graphs
alitv
Visualize whole genome alignments as linear maps
ancestry_hmm-s
Ancestry_HMM-S is program designed to infer adaptive introgression from population genomic data
ar_tools
autocoalhmm
bpp
Bayesian analysis of genomic sequence data under the multispecies coalescent model
cactus
Official home of genome aligner based upon notion of Cactus graphs
cafexp
Version 5 of the CAFE phylogenetics software
chromosomer
A reference-assisted assembly tool for producing draft chromosome sequences.
coalhmm
CoalHMM
coalhmm-1
The Coalescent Hidden Markov Model
comp-d_mpi
A program for comprehensive computation of D-statistics and population summaries using MPI
comparative_genome
construct
method for modeling continuous and discrete population genetic structure
conv_cal
Convergence event counting and probability calculation according to Zou and Zhang, 2015, Mol. Biol. Evol.
convcal
Python scripts for calculation of expected number of convergence in Zou and Zhang 2015
convergence
Detecting molecular basis of phenotypic convergnece
dfoil
DFOIL: Introgression Testing for Five Taxa
discovista
dsuite
Fast calculation of Paterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species
easysfs
Effective selection of population size projection for construction of the site frequency spectrum. Convert VCF to dadi/fastsimcoal style SFS for demographic analysis
eems
Estimating Effective Migration Surfaces
examl
Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI
exdfoil
Automated, exhaustive application of DFOIL to multi-individual RADseq data using GNU Parallel
freezing-archer
Tools for identifying introgressed archaic sequence.
gene_lists
List of gene lists for genomic analyses.
genomealignmenttools
Tools for improving the sensitivity and specificity of genome alignments
genomicpipelines
scripts writed during PHD
genomics-research-gwas
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