Kynon JM Benjamin's Projects
Short lessons from FAS Informatics coffee hour
:exclamation: This is a read-only mirror of the CRAN R package repository. clusterRepro — Reproducibility of Gene Expression Clusters. Homepage: https://www.ncbi.nlm.nih.gov/pubmed/16613834.
For the course project
The Leek group guide to data sharing
Helper Functions for LIBD Deconvolution
eQTL tutorial for tensorQTL
Visualization of Colocalization Between eQTL and GWAS Data
software developed during time in Erwin Paquola Labs
gputools R package for gpu computing
GTEx & TOPMed data production and analysis pipelines
models of intellectual property dynamics
R package with commonly used functions by the Jaffe lab
JHPDC 2020 Booklet
:triangular_ruler: Jekyll theme for building a personal site, blog, project documentation, or portfolio.
Prelude is an enhanced Emacs 25.1+ distribution that should make your experience with Emacs both more pleasant and more powerful.
Repository for Programming Assignment 2 for R Programming on Coursera
Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)
Quality Surrogate Variable Analysis for Degradation Correction
Using R with Jupyter / RStudio on Binder
rf
RNA-seq analysis
rnaseq bash sripts practice