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ncgl-syngenta avatar ncgl-syngenta commented on June 4, 2024 1

Ok - I've been able to build my own version with arrow. I removed a lot of other installs since our specific use case only needs parquet support, but the zip size still shoots up, mainly because of an arrow dependency file (40MB on its own)

Im going to paste the full dockerfile that we're using, in case anyone comes across this:

# modified from https://github.com/lambgeo/docker-lambda/blob/master/dockerfiles/Dockerfile.gdal3.6

FROM public.ecr.aws/lambda/provided:al2 as builder

RUN yum makecache fast
RUN yum install -y autoconf libtool flex bison cmake make tar gzip gcc gcc-c++ automake16 nasm readline-devel openssl-devel curl-devel cmake3

ENV PREFIX=/opt
WORKDIR /opt

ENV LD_LIBRARY_PATH $PREFIX/lib:$LD_LIBRARY_PATH

# pkg-config
ENV PKGCONFIG_VERSION=0.29.2
RUN mkdir /tmp/pkg-config \
  && curl -sfL https://pkg-config.freedesktop.org/releases/pkg-config-${PKGCONFIG_VERSION}.tar.gz | tar zxf - -C /tmp/pkg-config --strip-components=1 \
  && cd /tmp/pkg-config \
  && CFLAGS="-O2 -Wl,-S" ./configure --prefix=$PREFIX --with-internal-glib \
  && make -j $(nproc) --silent && make install && make clean \
  && rm -rf /tmp/pkg-config

ENV PKG_CONFIG_PATH=$PREFIX/lib/pkgconfig/

# sqlite
RUN mkdir /tmp/sqlite \
  && curl -sfL https://www.sqlite.org/2020/sqlite-autoconf-3330000.tar.gz | tar zxf - -C /tmp/sqlite --strip-components=1 \
  && cd /tmp/sqlite \
  && CFLAGS="-O2 -Wl,-S" CXXFLAGS="-O2 -Wl,-S" ./configure --prefix=$PREFIX --disable-static \
  && make -j $(nproc) --silent && make install && make clean \
  && rm -rf /tmp/sqlite

ENV \
  SQLITE3_LIBS="-L${PREFIX}/lib -lsqlite3" \
  SQLITE3_INCLUDE_DIR="${PREFIX}/include" \
  SQLITE3_CFLAGS="$CFLAGS -I${PREFIX}/include" \
  PATH=${PREFIX}/bin/:$PATH

# nghttp2
ENV NGHTTP2_VERSION=1.42.0
RUN mkdir /tmp/nghttp2 \
  && curl -sfL https://github.com/nghttp2/nghttp2/releases/download/v${NGHTTP2_VERSION}/nghttp2-${NGHTTP2_VERSION}.tar.gz | tar zxf - -C /tmp/nghttp2 --strip-components=1 \
  && cd /tmp/nghttp2 \
  && ./configure --enable-lib-only --prefix=$PREFIX \
  && make -j $(nproc) --silent && make install \
  && rm -rf /tmp/nghttp2

# libcurl
ENV CURL_VERSION=7.73.0
RUN mkdir /tmp/libcurl \
  && curl -sfL https://curl.haxx.se/download/curl-${CURL_VERSION}.tar.gz | tar zxf - -C /tmp/libcurl --strip-components=1 \
  && cd /tmp/libcurl \
  && ./configure --disable-manual --disable-cookies --with-nghttp2=$PREFIX --prefix=$PREFIX \
  && make -j $(nproc) --silent && make install \
  && rm -rf /tmp/libcurl

# libtiff
ENV LIBTIFF_VERSION=4.5.0
RUN mkdir /tmp/libtiff \
  && curl -sfL https://download.osgeo.org/libtiff/tiff-${LIBTIFF_VERSION}.tar.gz | tar zxf - -C /tmp/libtiff --strip-components=1 \
  && cd /tmp/libtiff \
  && LDFLAGS="-Wl,-rpath,'\$\$ORIGIN'" CFLAGS="-O2 -Wl,-S" CXXFLAGS="-O2 -Wl,-S" ./configure \
    --prefix=$PREFIX \
    --disable-static \
    --enable-rpath \
  && make -j $(nproc) --silent && make install \
  && rm -rf /tmp/libtiff

# geos
ENV GEOS_VERSION=3.11.2
RUN mkdir /tmp/geos \
  && curl -sfL https://github.com/libgeos/geos/archive/refs/tags/${GEOS_VERSION}.tar.gz | tar zxf - -C /tmp/geos --strip-components=1 \
  && cd /tmp/geos \
  && mkdir build && cd build \
  && cmake3 .. \
    -DCMAKE_BUILD_TYPE=Release \
    -DBUILD_TESTING=NO \
    -DCMAKE_INSTALL_PREFIX:PATH=$PREFIX \
    -DCMAKE_INSTALL_LIBDIR:PATH=lib \
    -DCMAKE_C_FLAGS="-O2 -Wl,-S" \
    -DCMAKE_CXX_FLAGS="-O2 -Wl,-S" \
  && make -j $(nproc) --silent && make install \
  && rm -rf /tmp/geos

ENV PROJ_VERSION=9.2.0
RUN mkdir /tmp/proj && mkdir /tmp/proj/data \
  && curl -sfL https://github.com/OSGeo/proj/archive/${PROJ_VERSION}.tar.gz | tar zxf - -C /tmp/proj --strip-components=1 \
  && cd /tmp/proj \
  && mkdir build && cd build \
  && cmake3 .. \
    -DCMAKE_BUILD_TYPE=Release \
    -DCMAKE_INSTALL_PREFIX:PATH=$PREFIX \
    -DCMAKE_INSTALL_LIBDIR:PATH=lib \
    -DCMAKE_INSTALL_INCLUDEDIR:PATH=include \
    -DBUILD_TESTING=OFF \
    -DCMAKE_C_FLAGS="-O2 -Wl,-S" \
    -DCMAKE_CXX_FLAGS="-O2 -Wl,-S" \
  && make -j $(nproc) --silent && make install \
  && rm -rf /tmp/proj

ENV ARROW_VERSION=12.0.0
RUN mkdir /tmp/arrow \
    && curl -sfL "https://www.apache.org/dyn/closer.lua?action=download&filename=arrow/arrow-${ARROW_VERSION}/apache-arrow-${ARROW_VERSION}.tar.gz" | tar zxf - -C /tmp/arrow --strip-components=1 \
    && cd /tmp/arrow/cpp \
    && mkdir build && cd build \
    && cmake3 .. \
    -DCMAKE_INSTALL_PREFIX=$PREFIX \
    -DCMAKE_PREFIX_PATH=$PREFIX \
    -DCMAKE_INSTALL_LIBDIR=lib \
    -Dxsimd_SOURCE=BUNDLED \
    -DCMAKE_C_FLAGS="-O2 -Wl,-S" \
    -DCMAKE_CXX_FLAGS="-O2 -Wl,-S" \
    -DARROW_BUILD_TESTS=OFF \
    -DARROW_PARQUET=ON \
    && make -j $(nproc) --silent && make install \
    && rm -rf /tmp/arrow

# We use commit sha to make sure we are not using `cache` when building the docker image
# "7ca88116f5a46d429251361634eb24629f315076" is the latest commit on release/3.6 branch

# gdal
RUN mkdir /tmp/gdal \
  && curl -sfL https://github.com/OSGeo/gdal/archive/7ca88116f5a46d429251361634eb24629f315076.tar.gz | tar zxf - -C /tmp/gdal --strip-components=1 \
  && cd /tmp/gdal \
  && mkdir build && cd build \
  && cmake3 .. \
    -DGDAL_USE_EXTERNAL_LIBS=ON \
    -DCMAKE_BUILD_TYPE=MinSizeRel \
    -DCMAKE_INSTALL_PREFIX:PATH=$PREFIX \
    -DCMAKE_INSTALL_LIBDIR:PATH=lib \
    -DCMAKE_PREFIX_PATH=lib \
    -DGDAL_SET_INSTALL_RELATIVE_RPATH=ON \
    -DBUILD_PYTHON_BINDINGS=OFF \
    -DBUILD_TESTING=OFF \
    -DCMAKE_C_FLAGS="-O2 -Wl,-S" \
    -DCMAKE_CXX_FLAGS="-O2 -Wl,-S" \
    -DGDAL_BUILD_OPTIONAL_DRIVERS=OFF \
    -DOGR_BUILD_OPTIONAL_DRIVERS=OFF \
    -DGDAL_USE_PARQUET=ON \
    -DGDAL_USE_ARROW=ON \
    -DOGR_ENABLE_DRIVER_ARROW=ON \
    -DOGR_ENABLE_DRIVER_ARROW_PLUGIN=ON \
    -DOGR_ENABLE_DRIVER_PARQUET=ON \
    -DOGR_ENABLE_DRIVER_PARQUET_PLUGIN=ON \
  && make -j $(nproc) --silent && make install \
  && rm -rf /tmp/gdal

# from https://github.com/pypa/manylinux/blob/d8ef5d47433ba771fa4403fd48f352c586e06e43/docker/build_scripts/build.sh#L133-L138
# Install patchelf (latest with unreleased bug fixes)
ENV PATCHELF_VERSION=0.10
RUN mkdir /tmp/patchelf \
  && curl -sfL https://github.com/NixOS/patchelf/archive/${PATCHELF_VERSION}.tar.gz | tar zxf - -C /tmp/patchelf --strip-components=1 \
  && cd /tmp/patchelf \
  && ./bootstrap.sh \
  && ./configure \
  && make -j $(nproc) --silent && make install \
  && cd / && rm -rf /tmp/patchelf

# FIX
RUN for i in $PREFIX/bin/*; do patchelf --force-rpath --set-rpath '$ORIGIN/../lib' $i; done

# Build final image
FROM public.ecr.aws/lambda/provided:al2 as runner

ENV PREFIX=/opt

COPY --from=builder $PREFIX/lib/ $PREFIX/lib/
COPY --from=builder $PREFIX/include/ $PREFIX/include/
COPY --from=builder $PREFIX/share/ $PREFIX/share/
COPY --from=builder $PREFIX/bin/ $PREFIX/bin/

RUN export GDAL_VERSION=$(gdal-config --version)

RUN yum install -y zip binutils

# remove any unneeded files
RUN rm -rdf $PREFIX/share/doc \
    && rm -rdf $PREFIX/share/man \
    && rm -rdf $PREFIX/share/cryptopp \
    && rm -rdf $PREFIX/share/hdf*

RUN cd $PREFIX \
    && find lib/ -type f -name \*.so\* -exec strip {} \; \
    && zip -r9q --symlinks /tmp/package.zip lib \
    && zip -r9q --symlinks /tmp/package.zip share \
    && zip -r9q --symlinks /tmp/package.zip bin/gdal* bin/ogr* bin/geos* bin/arrow* bin/proj* \
    && mv /tmp/package.zip /package.zip

FROM scratch AS exporter
COPY --from=runner /package.zip .

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vincentsarago avatar vincentsarago commented on June 4, 2024

we're not adding librarrow so I guess this is why the Parquet driver in not available. But it will be a nice addition.

I'm not sure I'll have time right now sadly but I'll be happy to review any PR 🙏

ref: https://gdal.org/development/building_from_source.html#arrow https://gdal.org/development/building_from_source.html#parquet

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vincentsarago avatar vincentsarago commented on June 4, 2024

it seems there are a lot of arrow compilation options that are set to ON by default that could be changed https://arrow.apache.org/docs/developers/cpp/building.html#optional-components

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vincentsarago avatar vincentsarago commented on June 4, 2024

some related issues

apache/arrow#33126
aws/aws-sdk-pandas#1977

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