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actions

Re-usable GitHub actions

anipose

🐜🐀🐒🚶 A toolkit for robust markerless 3D pose estimation

cellfinder

Automated 3D cell detection and registration of whole-brain images

dash_entrypoints

Dash entrypoints: CLI & wrapper for multi-page apps, layout callbacks, and more.

dotemacs

Litterate configuration for GNU Emacs

dotfiles-windows

My dot files in Windows.

ecephys_spike_sorting

Modules for processing extracellular electrophysiology data from Neuropixels probes

emacs-from-scratch

An example of a fully custom Emacs configuration developed live on YouTube!

emacs-gtd

Get Things Done with Emacs

fanshim-python

Python library for the Fan SHIM for Raspberry Pi

kilosort

Fast spike sorting with drift correction for up to a thousand channels

larsrollik

mouseland-facemap

Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.

mu4e-dashboard

A dashboard for mu4e (mu for emacs)

nano-emacs

GNU Emacs / N Λ N O - Emacs made simple

notebook-mode

GNU Emacs notebook mode

open-ephys-python-tools

Python code for interacting with the Open Ephys GUI

org-bib-mode

An Emacs minor mode for literate & annotated bibliography

org-ref

org-mode modules for citations, cross-references, bibliographies in org-mode and useful bibtex tools to go with it.

org-rifle

Rifle through your Org-mode buffers and acquire your target

pulsepal

Open source pulse train generator

pypulsepal

Python API to interact with PulsePal

real_time_place_preference

Simple ROI-based tracking paradigms

rpi_camera_colony

Central control for video acquisition with (many) Raspberry Pi cameras

sensapex-api

Meta-API for Sensapex Manipulators from uMx family.

serial_weighing_scale

Arduino-based cheap precision weighing scale for readout via serial communication.

svgpfa

Code for Sparse Variational Gaussian Process Factor Analysis (Duncker and Sahani, 2018)

templatepy

Template repository for python packages

timefrequency

tracknzap