leftygray Goto Github PK

analysis-with-programming

Repository of my blog

art_for_temporary_residents

Impact of providing ART to PLHIV who are ineligible for Medicare in Australia

australian_hbv_model

capitalin21stcenturyinr

Piketty in R

chlamydia_incidence_model

This project contains the code for a model to estimate trends in chlamydia incidence in Australia.

covasim

COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions

datasharing

The Leek group guide to data sharing

dirp

A bash script for managing dirs, pushd, and popd across terminals and systems.

epiforecasts.github.io

central website

epinow

Estimate Realtime Case Counts and Time-varying Epidemiological Parameters

epinow2

Estimate Realtime Case Counts and Time-varying Epidemiological Parameters

evaluation_modeling_scripts

firstpaper

hcv_prison_model

A mathematical model for simulating HCV treatment and prevention programs in the prison setting.

labs

Rmd source files for the HarvardX series PH525x

leek_analysis_replication

leftysrpkg

Personal R package containing functions I find useful day to day (under development)

leftysrstuff

Personal Rstudio and R files for personal use

prepsti

Individual-based, site-specific simulator of STI transmission

readingpapers

A guide to reading scientific papers

reviews

Writing reviews of academic papers

rpackages

R package development - the Leek group way!

scholmd

Learn how to use scholarly markdown

sei-seir_arboviruses

Climate-based mechanistic model of arbovirus transmission in Ecuador and Kenya.

talkguide

The Leek Group Guide to Giving Talks

wsl-config

My personal Windows Subsystem for Linux (WSL) config and script files