levitsky Goto Github PK

aa_stat

AA_stat tool is for searching uncovering the unexpected modifications of amino acid residues in the protein sequences, as well as possible artifacts of data acquisition or processing, in the results of proteome analyses.

biolccc

libBioLCCC is an open source C++ library for prediction of peptide and protein retention times in liquid chromatography. It is based on BioLCCC (Liquid Chromatography of Biomacromolecules at Critical Conditions) model of liquid chromatography of peptides and proteins. pyteomics.biolccc is a Python library based on libBioLCCC The project documentation is hosted at http://packages.python.org/pyteomics.biolccc, pyteomics.biolccc can be downloaded at http://pypi.python.org/pypi/pyteomics.biolccc

biolccc_backup

Archive of repository data from BitBucket

biosaur2

bitbucket-hg-exporter

A tool for exporting all project data from a BitBucket mercurial repository

bitbucket_backup

Archive of repository data from BitBucket

diffacto

groupfilter

identipy

identipy_server

iqmma

Project improves quantitative analysis by applying multiple feature detection tools and pick the best from their results.

metrics

numpy

Numpy main repository

proteomics-metadata-standard

The Proteomics Experimental Design file format: Standard for experimental design annotation

pyteomics

Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provides a growing set of modules to facilitate the most common tasks in proteomics data analysis.

pyteomics-utils

Simple but handy CLI tools for everyday data analysis tasks

pyteomics.cythonize

Cython Implementations of Common Pyteomics Functions

python-wheels-manylinux-build

GitHub Action to build Python manylinux wheels

sdrf-pipelines

A repository to convert SDRF proteomics files into pipelines config files

specpride

Analysis of different consensus spectrum construction methods

theorchromo

Source code for theorchromo.ru, a Web tool for retention time prediction based on pyteomics.biolccc

vimrc

The vimrc file I use on all machines.