liamtimms Goto Github PK

anima-public

Open source software for medical image processing from the Empenn team

ants

Advanced Normalization Tools (ANTs)

arc-theme

A flat theme with transparent elements (actively maintained fork)

art

aur

repository for working on AUR files

bashscripts

Scripts I wrote in Bash to make my life easier.

bruker_ute_data_extraction

code for extracting Bruker from 2016-2018

configs

My personal dotfiles.

datasworn

Ironsworn rules data for use in community-created tools, because there's no use in duplicating labour on the data entry.

dcm2bids

Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure

dcm2niix

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

dicom_parser

Facilitates DICOM data access.

dracula.nvim

Dracula colorscheme for neovim written in Lua

full_image_header

extracts and processes full information contain in Seimens DCM headers

guacamole

from lecture 1

hystrath

Hypersonic / Rarefied gas dynamics code developments (GPL-3.0)

intensity-normalization

normalize the intensities of various MR image modalities

intro-git

A repository to practice your git skills

ismrm-moco-workshop

ismrmrd-python

Python API for the ISMRMRD file format

itksnap

ITK-SNAP medical image segmentation tool

kuramoto-neurons

code for "Synchronization in phase-coupled Kuramoto oscillator networks with axonal delay and synaptic plasticity"

liamtimms.github.io

experimental website

matlab-codes

mrarch

Scripts to set up Arch Linux for MRI and Neuroimaging.

niftymic

NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.

nord-vim

An arctic, north-bluish clean and elegant Vim theme.

notesandexercises

nvim-lua-temp

temporary repo for playing with an alternative lua first nvim config

onboarding