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followers: 24.0 following: 24.0 repos: 26.0 gists: 15.0

Name: Hirokazu Takaya

Type: User

Bio: Clinical research associate and open source Python library developer in Japan.

Twitter: lisphilar

Location: Japan

Blog: https://www.kaggle.com/lisphilar

👨‍💼Work as a data anaylist in clinical data scieince field and 👨‍💻develop Python project, including CovsirPhy library, as a hobby.
Clinical research associate previously.

Clinical data scientist in Japan. Python library developer.
分子生物学(2012-2018 M.Eng.), 生命情報科学(2014- 独学), 医薬品臨床試験(2018−2023 CRA), 医療データ解析(2024-).
#CovsirPhy

Category	Item	Inforamtion
Info	Keyword	Molecular biology, Neurochemistry, Bioinformatics, Clinical trials, Clinical data science, Python library development, Japanese history
	Language	Japanese, Python, English
	Where	Japan
	Favorite book	What Is Life? by Schrödinger
Job	2018/4-2023/12	CRA / Clinical research associate
	2024/1-current	Data analyst in clinical data science
Academic	Degree	Bachelor of Engineering (Life Science Program) Master of Engineering (Chemical and Energy Engineering)
	College	College of Engineering Science, YOKOHAMA National University, Japan.
	Graduate school	Graduate school of Engineering, YOKOHAMA National University, Japan.
	Subject of bachelor/master's thesis	Protein-protein interaction site analysis to develop a drug for central nervous system injuries
Tool	Python	From 2014
	R	Learned from 2012 to 2014, from 2023
	Editor	Visual Studio Code
	Note taking	Obsidian, Google Colaboratory
	OS	Windows / Windows subsystem for Linux
	Learning	Data science with Python (self-study) / Coursera / edX

Lisphilar: Life science + philosophy of science + molecular biology

Products

I have published the following libraries and notebooks. Please collaborate with me for development!

COVID-19 data analysis

GitHub/PyPI: CovsirPhy: Python library for COVID-19 data analysis with phase-dependent SIR-derived ODE models
Kaggle Notebook: COVID-19 data with SIR model
Dataset: COVID-19 dataset in Japan

Scenario files of Sengokushi (Japanese history, written in Japanese)

GitHub: 豊徳二重公儀の統合

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Hirokazu Takaya's Projects

.github

article_qiita

Articles published in Qiita.

consort

Create CONSORT diagrams for clinical studies.

coursera.cicd.lab

Making Data Science Work for Clinical Reporting: CI/CD Lab.

covid19-sir

CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.

datasciencecoursera

Data Scientist's Toolbox by Coursera

datasharing

The Leek group guide to data sharing

dim

📦 dim: Manage the open data in your project like a package manager.

exdata_plotting1

Plotting Assignment 1 for Exploratory Data Analysis

gcda_assessment

Getting and Cleaning Data Course Project

gcp

Analyse ICH/J-GCP of clinical studies.

gitignore

A collection of useful .gitignore templates

kaggle_notebooks

Notebooks I published in Kaggle platform

kaipred

KAIPred: command line tool of Kakeibo (account book) with Python. Currently, in development stage.

lisphilar

Self-introduction

methodtools

Expand functools features(lru_cache) to class - methods, classmethods, staticmethods and even for (unofficial) hybrid methods.

odloader

Open Data Loader for Python.

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

polars

Dataframes powered by a multithreaded, vectorized query engine, written in Rust

programmingassignment2

Repository for Programming Assignment 2 for R Programming on Coursera

r_language

Learn R language.

repdata_peerassessment1

Peer Assessment 1 for Reproducible Research

scatterd

Easy and fast manner of creating scatter plots

seaborn_analyzer

sengokushi

Lisphilar's repository regarding Sengokushi

xlsx2csv

Convert xslx to csv, it is fast, and works for huge xlsx files

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