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Chuan Liu's Projects

benchmark_eval icon benchmark_eval

Benchmark Evaluation of Protein–Protein Interaction Prediction Algorithms

bioinfokit icon bioinfokit

Bioinformatics data analysis and visualization toolkit

handson-ml2 icon handson-ml2

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

msk-impact-io icon msk-impact-io

2022.nbt.Improved prediction of immune checkpoint blockade efficacy across multiple cancer types

rnaseq_tutorial icon rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

stackppi icon stackppi

Improving protein-protein interactions prediction accuracy using XGBoost feature selection and stacked ensemble classifier

to-gcn icon to-gcn

Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) data

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