Comments (2)
That's really a question for base::svd
, not BiocSingular. I note that you have a very small number of actual dimensions, so you could ask BiocSingular to compute the SVD via a cross-product instead - see the ?fold
argument.
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Touché.
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Related Issues (13)
- `runIrlbaSVD()` on DelayedMatrix HOT 3
- runSVD with RandomParam() returns inverted values HOT 2
- Add an approx.pts option to runPCA to downsample points HOT 1
- Make deferred=NA the default for IrlbaParam and RandomParam
- show method for LowRankMatrix gives `'S4' is not subsettable` on some machines HOT 1
- Feature request: Generalize `runExactSVD`, `runIrlbaSVD` ... and other SVD functions, make methods depend on the matrix type HOT 1
- replacing the interface of irlbaSVD with CppIrlba `request` HOT 1
- Installation HOT 3
- Installation error HOT 8
- Travis complains: BiocSingular not available for R 3.6.0 HOT 3
- Add arg for sce methods to name reducedDim output HOT 2
- DelayedArray and SVD questions HOT 8
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