Luca Cozzuto's Projects
A curated list of awesome nanopore analysis tools.
A curated list of nextflow based pipelines
Conda recipes for the bioconda channel.
Nextflow functions for biological tools
GATK RNA-Seq Variant Calling in Nextflow
Chromatin immunoprecipitation (ChIP-seq) analysis using BWA and MACS2 with QC steps.
Nice things to cook around Christmas
my pipeline
Some useful stuff about covid19 pandemics
Scripts for making plots
some script for making plots
Signal based nanopore RNA demultiplexing with convolutional neural networks
An R package to conveniently run DESeq2, edgeR, and QNB for the detection of differential methylation in MeRIP/m6A-seq data.
Basic Docker image for running CentOS with perlbrew installed
Pipeline for initial analysis of droplet-based single-cell RNA-seq data
ABM model about Industrial revolution
elixir_NF
small repo for reproducing a nextflow error
A fast, easy way to present complex bioinformatics pipelines to biologists
Pipeline for processing inDrops sequencing data
infn
Simple script for making a folder structure
Shows the relevant part of NPM module's README file right in your terminal
Most simple webapp to bulk follow bioinformatics accounts on Mastodon.
A simple documentation theme for Jekyll.
Repository to host tool-specific module files for the Nextflow DSL2 community!