lumc Goto Github PK
Name: Leiden University Medical Center
Type: Organization
Location: Leiden, The Netherlands
Blog: http://www.lumc.nl/
Name: Leiden University Medical Center
Type: Organization
Location: Leiden, The Netherlands
Blog: http://www.lumc.nl/
Ansible role for installing galaxy on a node connected to a cluster.
Ansible role for setting up an xwiki instance that is powered by a docker stack.
Argalaxy Immune Repertoire pipeline
Conda recipes for the bioconda channel.
CACTUS: Clonal Architecture of genomic Clustering of TUmor Single cells
Data of manuscript: "CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells"
R package with Shiny application for DGE analysis
The Web framework for perfectionists with deadlines.
Django friendly finite state machine support
A basic galaxy container for docker-compose setups. Includes a conda installation.
Container with pysam, tqdm on python 3.7 on debian stretch
Docker image based on debian:buster that includes both singularity version 3 and snakemake 5.4
For building a docker image on Ubuntu with Grid Engine, DRMAA, and miniconda installed.
Materials for Essentials for Data Science, a course of Statistics and Data Science master at Leiden University.
Essentials for Data Science: 3*4h course on relational databases
Fork of the FAIR Data Point repository, collecting changes and issues with the FDP implementation at the LUMC.
A fast FASTQ filter program.
Splits fastq files evenly
very basic FHIR client used send data to a FHIR-endpoint (used by github.com/LUMC/fhirhose )
Short read pipeline using bwa-mem2, freebayes and whatshap to call phased variants
A project to launch the galaxy docker image easily using ansible
A program to calculate coverage per feature over one or more samples.
A python program that will mirror git repos by automated push pulling
Project management and code hosting application. Follow us on twitter @gitlabhq
Snakemake pipeline to merge gnomAD VCF files
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.