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3dmol.js

WebGL accelerated JavaScript molecular graphics library

ai-research-tools

:hammer:AI 方向好用的科研工具

alpha

A toolkit for automated local phylogenomic analyses, or ALPHA

alphafold

Open source code for AlphaFold.

augustus

Genome annotation with AUGUSTUS

autodock-vina

AutoDock Vina

bandage

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

big-map

big-scape

Similarity networks of biosynthetic gene clusters

bigscape-corason

bigslice

A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data

bioinformatics123

blasr

BLASR: The PacBio® long read aligner

brew

🍺 The missing package manager for macOS (or Linux)

bwa

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

cagecat

CompArative GEne Cluster Analysis Toolbox

canopus_treemap

CANOPUS visualization for Jupyter notebook

canu

A single molecule sequence assembler for genomes large and small.

catfasta2phyml

Concatenates FASTA formatted files to one "phyml" (PHYLIP) formatted file

cblaster

Find clustered hits from a BLAST search

chloroplast_assembly_protocol

A set of scripts for the assembly of chloroplast genomes out of whole-genome sequencing reads

chloroplastphylogenomics

classifynpdb

All necessary script to run the pipeline I created during my Bsc Thesis

clean

CLEAN: a contrastive learning model for high-quality functional prediction of proteins

clinker

Gene cluster comparison figure generator

clustermap.js

cp-hap

Estimate the ratio of different directions of single copy in the chloroplast genome

cpff

cs_ccme_posts

公众号推送备份

decimer.ai

This repository contains the code for https://decimer.ai