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gene_id annotation about sqanti2 HOT 2 CLOSED

morellr avatar morellr commented on June 16, 2024
gene_id annotation

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morellr avatar morellr commented on June 16, 2024

I should have been clearer: in previous versions a *.renamed_corrected.gtf.cds.gff was produced that used overlapping gene names from the reference gtf as the gene_id. In v.7.3.2, this file is not made.

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morellr avatar morellr commented on June 16, 2024

Embarassing. I see now that the equivalent output is made in v.7.3.2 -- just the naming convention is different. Now this file is *rep_corrected.gtf
Sorry for the confusion.

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