Related Issues (20)
- Different nomenclature in genome_features between Ag and Af HOT 4
- Dash set lower wheel zoom sensitivity
- `af1.add_extra_metadata()` FileNotFoundError HOT 2
- A function or method to know what is under embargo and what is free to use HOT 1
- Fix random_region_str() to always select region within contig_size HOT 1
- Support authenticated access to GCS
- Add support for Python 3.12
- 'AssertionError' when trying to return 'variant_allele' from biallelic_snp_calls()
- Update mailing address on API client info
- UserWarnings when using bokeh.layouts.gridplot for GWSS HOT 4
- sample_query argument for cnv_discordant_read_calls function
- Key errors on `snp_calls()` HOT 1
- Amend anoph snp_data.py where GQ, AD, MQ are still expected to be alongside GT HOT 2
- Pandas FutureWarning: 'A' is deprecated and will be removed in a future version, please use 'Y' instead
- Bokeh BokehDeprecationWarning: 'circle() method with size value' was deprecated in Bokeh 3.4.0 and will be removed, use 'scatter(size=...) instead'
- Pandas FutureWarning: ChainedAssignmentError: behaviour will change in pandas 3.0
- Pandas FutureWarning: Setting an item of incompatible dtype is deprecated
- Z score for Fst
- plot_pairwise_average_fst may change the order of the cohorts when using a cohort dict HOT 1
- Pairwise Fst plots - Only plotting one information on each plot HOT 1
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