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Daniel Margulies's Projects

adjacency_plot icon adjacency_plot

A Shiny app demonstrating how to create and read a network adjacency plot using R and ggplot2

afni icon afni

Official AFNI source and documentation

areal icon areal

Areal interpolation scripts, for analysis of brain cortical surface area.

aspp-2018-numpy icon aspp-2018-numpy

Material for the Advanced Scientific Programming in Python course on advanced numpy

bias icon bias

bits of software for manipulating and analysing brain images in the nifti format

brainspace icon brainspace

BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |

brainsvg icon brainsvg

Scripting svg coloring and annotation for neuroscience

cluster_roi icon cluster_roi

Python script to perform the spatially constrained parcellation of funcitonal MRI data as described in Craddock et al., Human Brain Mapp., 33 (9) 2012

code-for-the-world icon code-for-the-world

A tutorial for Advanced Scientific Python Programming on organizing, documenting, and distributing code

cog icon cog

Code for the COG dataset and network

congrads icon congrads

Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. connectopic mapping) and fitting the results with a spatial statisical model that summarises the map in terms of a limited number of trend surface model coefficients.

data icon data

Consolidation des données de sources officielles concernant l'épidémie de COVID19

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