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abc_pipeline

bayescan_convert

A (relatively) simple R script to convert a large genepop file into a Bayescan infile; based on several functions from the diveRsity R package.

birds_test

An exercise in version control

cees_workshop_2017

A repository for the CEES Population genomics workshop Nov 2017

convert_ambiguity_codes

A simply python script to randomly convert ambiguity codes in a FASTA file.

ebird_light_pollution

evop2017

evop_2018

Scripts for EVOP 2018

genome_sampler

R scripts to sample genome at random

genotyping_pipeline

A flexible genotyping pipeline written using nextflow. This pipeline will take you from raw reads to a filtered vcf, leaving more time for interesting analyses!

gerbil_plague_resistance

Scripts and code for Nilsson et al

haplotype_to_genepop

R scripts to convert Stacks haplotype output to a genepop file for use in diveRsity

house_sparrow_commensalism

life4141_popgenomics

littorina_denovo_rad

Scripts used for analysis of L. saxatilis de novo RAD assembly

markravinet.github.io

Lab website for the ecological and evolutionary genetics group at the Centre for Ecological and Evolutionary Synthesis at the University of Oslo, Norway - https://markravinet.github.io/

minimal-mistakes

:triangular_ruler: Jekyll theme for personal sites, blogs, and portfolios. Two-columns and extremely flexible.

myworkflowr_test

A test for workflowr

nord_practicals

novembre_etal_2008_misc

Resources related to Novembre et al (2008) Nature 456:98-101

old_markravinet.github.io

Github website

phasing_pipeline

A nextflow pipeline for fast and efficient phasing

pumpkins_test

A tutorial on github

rad_pooler

Perl and bash scripts to sample reads from a set of fastq files

tirupati_genomics

Github repo for the January 2024 Tirupati Genomics workshop

tjarno

Demographic inferences from NGS data