Comments (1)
martinjzhang
commented on August 22, 2024
Hi @Ararder
Thank you for the question. You can use the scdrs compute-score --cov-file function to adjust for donor effects. To do so, you can add one-hot encoding of each donor (all but one) to the .cov file. For example, if there are 3 donors, the .cov file should contain 3 binary variables: const (all 1), donor1, and donor2.
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Related Issues (20)
- compute-score is not reading .gs file properly HOT 2
- custom gene set ? HOT 2
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- About compute-score
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