Comments (2)
This would be awesome, thanks @ivagljiva @tdelmont ! The team here in Montpellier (@HansSCHR and @btrouche) would be really interested by this and happy beneficiaries too. Please let us know if we can help in any way (providing feedback on our datasets or something else)
from anvio.
I think the way to do this is to follow the footsteps of anvi-get-pn-ps-ratio
or anvi-gen-fixation-index-matrix
and implement something that works with a variability-profile-txt artifact directly.
If we can come up with a good design, all programs that work with variability-profile-txt would accept flags that produce such summaries at the function- or metabolism-level :)
from anvio.
Related Issues (20)
- Error running `anvi-reaction-network` HOT 22
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from anvio.