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Name: Max Winston
Type: User
Company: EQRx
Location: Cambridge, MA
Name: Max Winston
Type: User
Company: EQRx
Location: Cambridge, MA
Scripting to create an absence-presence matrix (APM) from GBS data. Specifically, take the output of pyRAD (.loci and .stats file), and create a APM and sample output files
Repository for scripts to generate allele frequency spectrum from pyRAD output file (Eaton, 2014) and test competing a priori models using the Diffusion Approximation for Demographic Inference (dadi)
Basic R Script to take .usnps.geno file generated by pyRAD, compute the Fst values across a two-pop sample, and compare to a null sample.
Repository for implementation of Generalized Phylogenetic Coalescent Sampler (G-PhoCS)
Scripts to investigate GBS loci
In silico digestion of genomes with restriction enzymes (focus on ApeK1)
Repository for all shape analysis related code
Simple codes for using a cross-validation technique on Sanderson's penalized likelihood method implemented in chronos (R)
Scripts used for Cannabis microbiome project (Winston et al., 2014: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0099641)
notes from my 302 class on Bayesian methods and principles of statistics
Labs I wrote for Introduction to Statistical Genetics (HGEN47100) with John Novembre, Brandon Pierce, and Lin Chen
This is a simple python script which takes in a two-sample unlinked_snps file from pyRAD (technical replicates) to evaluate genotype accuracy. The outputs are the location of the snps in the larger unlinked_snps file, and then a binary matching score.
Collection of scripts (Python and R) to accomplish miscellaneous tasks
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.