New error on windows: RuntimeError: Encountered inf in predicted array about nnunet

[rw579]

@hari3100 thanks

[hari3100]

Same issue when running the totalsegmentator model on windows , i went down couple versions , v2.2.1 , it worked well.

[rw579]

Same issue when running the totalsegmentator model on windows , i went down couple versions , v2.2.1 , it worked well.

@hari3100 Can you share a pip list/freeze?

[hari3100]

@rw579 here it is :

Package Version

---

acvl_utils 0.2
asttokens 2.4.1
attrs 23.2.0
backports.tarfile 1.2.0
batchgenerators 0.25
batchgeneratorsv2 0.2
beautifulsoup4 4.12.3
bs4 0.0.2
certifi 2024.7.4
charset-normalizer 3.3.2
colorama 0.4.6
comm 0.2.2
connected-components-3d 3.18.0
contourpy 1.2.1
cycler 0.12.1
dataclasses 0.6
debugpy 1.8.2
decorator 5.1.1
dicom2nifti 2.4.11
dill 0.3.8
docutils 0.21.2
dunamai 1.18.0
dynamic_network_architectures 0.3.1
einops 0.8.0
exceptiongroup 1.2.2
executing 2.0.1
fft-conv-pytorch 1.2.0
filelock 3.15.4
fonttools 4.53.1
fsspec 2024.6.1
future 1.0.0
graphviz 0.20.3
idna 3.7
imagecodecs 2024.6.1
imageio 2.34.2
importlib_metadata 8.2.0
ipykernel 6.29.5
ipython 8.26.0
ipywidgets 8.1.3
jaraco.classes 3.4.0
jaraco.context 5.3.0
jaraco.functools 4.0.2
jedi 0.19.1
Jinja2 3.1.4
joblib 1.4.2
jsonschema 3.2.0
jupyter_client 8.6.2
jupyter_core 5.7.2
jupyterlab_widgets 3.0.11
keyring 25.3.0
kiwisolver 1.4.5
lazy_loader 0.4
linecache2 1.0.0
markdown-it-py 3.0.0
MarkupSafe 2.1.5
matplotlib 3.6.2
matplotlib-inline 0.1.7
mdurl 0.1.2
monai 1.3.2
more-itertools 10.3.0
mpmath 1.3.0
multiprocess 0.70.16
nest_asyncio 1.6.0
networkx 3.3
nh3 0.2.18
nibabel 5.0.0
nii2dcm 0.1.5
nnunetv2 2.5.1
numpy 1.23.2
opencv-python 4.10.0.84
p_tqdm 1.4.0
packaging 24.1
pandas 2.2.2
parso 0.8.4
pathos 0.3.2
pickleshare 0.7.5
pillow 10.4.0
pip 24.2
pkginfo 1.11.1
platformdirs 4.2.2
plotly 5.23.0
pox 0.3.4
ppft 1.7.6.8
prompt_toolkit 3.0.47
psutil 6.0.0
pure_eval 0.2.3
pyarrow 17.0.0
pydicom 2.3.0
pydicom-seg 0.4.1
Pygments 2.18.0
pyparsing 3.1.2
pyrsistent 0.20.0
python-dateutil 2.9.0
python-gdcm 3.0.24.1
pytz 2024.1
pywin32 306
pywin32-ctypes 0.2.2
PyYAML 6.0.1
pyzmq 26.0.3
readme_renderer 44.0
requests 2.32.3
requests-toolbelt 1.0.0
rfc3986 2.0.0
rich 13.7.1
rt-utils 1.2.7
scikit-image 0.24.0
scikit-learn 1.5.1
scipy 1.14.0
seaborn 0.13.2
setuptools 69.5.1
SimpleITK 2.3.1
six 1.16.0
soupsieve 2.5
stack-data 0.6.2
sympy 1.13.1
tcia_utils 2.1.15
tenacity 9.0.0
threadpoolctl 3.5.0
tifffile 2024.7.24
torch 2.4.0
tornado 6.4.1
TotalSegmentator 2.2.1
tqdm 4.66.4
traceback2 1.4.0
traitlets 5.14.3
twine 4.0.2
typing_extensions 4.12.2
tzdata 2024.1
Unidecode 1.3.8
unittest2 1.1.0
urllib3 2.2.2
wcwidth 0.2.13
wheel 0.43.0
widgetsnbextension 4.0.11
xvfbwrapper 0.2.9
yacs 0.1.8
zipp 3.19.2