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addon-pyone

PyONE: Open Nebula Python Bindings

basic-programming-in-drug-discovery

Course materials for basic programming in drug discovery

basic_streamlit_dask_setup

chebi-mesh-cw-mapping

A script to read a Chebi OBO file and use Mesh (HTML) to link it to ConceptWiki

check-cw-chemspider-labels

Check the labels of the Chemspider branch of ConceptWiki by using the TTL files and CW-API

container-galaxy-k8s-runtime

PhenoMeNal runtime for Galaxy running inside a container orchestrator

csv-to-web

A tab/txt to search-engine and API database using MongoDB, Ratpack and Groovy

csv-to-web-client

An example on how to connect to the Simple Compound Database from Groovy

cuddly-enigma

temp repo for container building

dodask

Sandbox project to export and to find out how to do-dask

dynamic-content-githubio

A test to host on demand info on Github.io pages using Javascript

enzyme-mesh-conceptwiki

A little script that reads the expasy.org Enzyme database and uses it to find the matching MeSH identifier and ConceptWiki UUID

etfandstockstats

Statistics of ETF and/or Stocks

gremlin-sandbox

Some example/test scripts for Gremlin/Groovy/Neo4J

groovy-af

A easy way to jumpstart your Java or Groovy web-app. It uses Gradle to build and to run Jetty or to produce a WAR.

gscf

Generic Study Capture Framework

gscf-vagrant

Easy way to get started with GSCF using Vagrant

hmdb-mongo

Create a local copy of the Human Metabolome Database using PHP and MongoDB

hmp_client

Python-based client for downloading files hosted by the Human Microbiome Data Analysis and Coordination Center (hmpdacc.org).

jekyll-test

A test site to try Jekyll

jupyterhub-example-course

sandbox course for testing the jupyter-hub server

kubernetes-omero

Kubernetes Helm charts for OMERO

kubespray-ebi-portal

Kubespray deployment using the EBI Cloud Portal specification

learn-percentages

Learn how to deal with percentages

metabolomicsmodule

Module for storing Metabolomics Data

natural-gas-supply-and-consumption

Accessing open data on Natural gas; supply and consumption in Python

pyda-sandbox

Python Data Analysis sandbox

python-bitvavo-api

Python wrapper for the Bitvavo API

python-course-materials

pythondatasciencehandbook

Python Data Science Handbook: full text in Jupyter Notebooks