Related Issues (20)
- Re-ID, Ingest to Napa DB and Verify Napa compliance for "Stegen" study: `nmdc:sty-11-aygzgv51` HOT 3
- Invalid URLs in Markdown files HOT 1
- GHA: Use lychee directly instead of using baler
- make sure `local/.env.template` gets into and stays in the repo
- review configuration and invocation approaches ion legacy code and new code
- create a `homepage` subslot of `websites`, esp. for `Study`
- Markdown docs contain broken links HOT 2
- Address broken links reported by Lychee HOT 1
- Update nmdc_database_tools `extract-study` command to extract multiple studies
- Global definition of was_informed_by contradicts the class slot_usage. Remove slot_usage and fix the global definition
- Refine MassSpectrometry Class HOT 3
- merge current `nmdc-schema` into `berkeley-schema-fy24` HOT 6
- Handle emsl:output does not match nmdc:dobj failures vs. v10.1 schema HOT 2
- Handle nmdc:nnn does not match nmdc:dobj errors
- Re-ID, Ingest to Napa DB, and Verify Napa compliance for "DeepShale" study: `nmdc:sty-11-8fb6t785` HOT 5
- Re-ID, Ingest to Napa DB, and Verify Napa compliance for "Populus" study `nmdc:sty-11-1t150432` HOT 6
- Followup from deletion of `Reaction` class
- Deprecate, don't delete `Reaction`? HOT 3
- `get_nmdc_file_type_enums` errors out because it refers to enum that doesn't exist
- ChemicalConversionProcess class refactor HOT 1
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