Related Issues (20)
- `src/data/valid/Database-biosample-exhasutive.yaml` requires MIxS `multivalued` slots with class ranges to be `inlined_as_list` HOT 2
- `eluent_introduction_category` modeling broken in latest backmerge HOT 5
- nmdc-schema should not use `string_serialization`
- 2024 nmdc-schema paper? HOT 1
- remove `domain` assertions from slot definitions HOT 1
- minimize use of `any_of` r`ange`s, `rules` and `slot_usages`
- `berkeley-schema-fy24`: Finalize names of Berkeley schema migrators HOT 3
- update to enforce including id_version in WorkflowExecutionActivity subclasses HOT 3
- Add alternative identifiers to WorkflowExeuctionActivity
- Add PR template HOT 5
- Update `FailureWhereEnum` to reflect updated class names HOT 8
- Migrations: Update adapter to support callback for when a new collection is being processed
- Migrations: Update migrators to raise Exception instead of printing error message HOT 3
- Migrations: Implement `do_for_each_document` Adapter method
- Migrations: Implement `set_field_of_each_document` Adapter method
- Migrator: Write migrator for `NomAnalysisActivity` documents HOT 5
- Queries to delete legacy orphan data objects and functional annotation agg records HOT 2
- Migrations: Update migrator skeleton creation tool to use template and remove leading/trailing newlines
- `berkeley-schema-fy24`: `make squeaky-clean all` fails at `gendoc` command HOT 6
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