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Efraim Flashner's Projects

bitshuffle icon bitshuffle

Filter for improving compression of typed binary data.

blobtools icon blobtools

Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

bootchart icon bootchart

merge of bootchart-collector and pybootchartgui

dbxfs icon dbxfs

User-space file system for Dropbox

freebayes icon freebayes

Bayesian haplotype-based genetic polymorphism discovery and genotyping.

gemma icon gemma

Genome-wide Efficient Mixed Model Association

getapod icon getapod

script to download NASA's Astronomy Pictures of the day

hfs icon hfs

Linux port of Apple's hfs code

libepoxy icon libepoxy

Epoxy is a library for handling OpenGL function pointer management for you

libevent icon libevent

A public libevent repository. The official repository is at https://github.com/libevent/libevent

mrustc icon mrustc

Alternative rust compiler (re-implementation)

ngmlr icon ngmlr

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations

openbios icon openbios

First published Open Source implementation of OpenFirmware

paryfor icon paryfor

parallel_for based on atomic queues and C++11 threads

pe icon pe

Package pe implements access to the Portable Executable (PE) file format.

ratspub icon ratspub

Using PubMed to find out how a gene contributes to addiction.

rdrview icon rdrview

Firefox Reader View as a Linux command line tool

sailfish icon sailfish

Rapid Mapping-based Isoform Quantification from RNA-Seq Reads

screenfetch icon screenfetch

Fetches system/theme information in terminal for Linux desktop screenshots.

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