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baton

iRODS client programs and API

containers

Singularity and Docker material

exodus

Painless relocation of Linux binaries–and all of their dependencies–without containers.

extendo

An extension to baton providing a Go API for iRODS (Integrated Rule-Oriented Data System)

ggtags

Emacs frontend to GNU Global source code tagging system.

go-baton

lost_and_found

ml-warehouse-python

ml_warehouse

Perl DBIx binding to a warehouse housing data from multiple LIM systems

npg-irods-python

Applications for the management of data and metadata in iRODS

npg-metadata-sync

Synchronise iRODS metadata with upstream LIMS

npg_conda

NPG Conda recipes and tools

npg_id_generation

npg_irods

Tools for managing HTS (BAM and CRAM) format files in iRODS.

npg_ml_warehouse

Analysis results loader for the multi-lims warehouse, see ml_warehouse project for the warehouse details.

npg_qc

QC checks and metrics for Illumina NGS data

npg_seq_common

Utilities for handling NGS data

npg_seq_pipeline

Processing and analysis of data coming from Illumina sequencing machines

npg_tracking

WTSI Illumina sequencing instruments (HiSeq, MiSeq, GA) tracking

partisan

A Python client API for iRODS

perl-dnap-utilities

WTSI DNA Pipelines Perl Utility Library

perl-irods-wrap

Perl iRODS Client Wrapper Library

valet

Automated data mangement for Oxford Nanopore DNA sequencing instruments