mouse-imaging-centre Goto Github PK
Name: Mouse Imaging Centre, Hospital for Sick Children, Toronto Canada
Type: Organization
Location: 25 Orde Street, Toronto, Ontario M5T 3H7
Name: Mouse Imaging Centre, Hospital for Sick Children, Toronto Canada
Type: Organization
Location: 25 Orde Street, Toronto, Ontario M5T 3H7
Canonical repository for organization-wide README.md.
MINC wrapper for python's scikit-learn for tissue/lesion/etc classification
Wrapper package for dcm2bids to convert POND and KIND dicom directories to BIDS
Fast Deep Neural Networks for Cell Image Analysis
Given an input Jacobian determinant, this code will generate a deformation field that produces that Jacobian field. (Made for MINC format files)
Provides a Makefile based on Vlad Fonov's Makefile from the EZminc package, and includes additional packages that allow you to build a full quarantine capable of image registration (geared by default to MRI mouse brain registration)
Singularity container definition for MICe/Oxford neuroimaging software
Scripts and pipelines that are specific to the Mouse Imaging Centre lab. These programs are not very likely to be applicable to other centres.
Nix expressions for installing some MINC-related medical image processing software
Spack packages of MICe software (and some external dependencies)
various scripts processing minc files or minx-associated files
Scripts and bits of code for minc files.
Making containers with minc-toolkit
Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
Packer built VMs with minc-toolkit and friends
Julia bindings for the MINC medical imaging library (libminc2)
simplified MINC2 API
Laplace's equation for measuring thickness (or other uses of streamlines) between two boundaries
A book detailing how do an end-to-end mouse imaging analysis
Front page of the Mouse Imaging Centre
R package for MRI data visualization
Use the Nix package manager to build imaging pipelines
py_minc is a python module for working with MINC data format files, and was developed by John G. Sled.
Python code for flexible pipeline control
A python interface to the MINC 2 library, allowing use of numpy arrays to access MINC data, and other such similar goodies, developed by Jason Lerch
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.