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hi, i'm mark

I am a Research Software Scientist for rOpenSci, as part of which I develop open-source tools to automatically analyse and assess software. These include

  • pkgcheck to implement an array of checks on R packages.
  • pkgstats to extract code statistics from every R package ever.
  • autotest to automatically test R packages by mutating inputs.

Urban Analyst

I am also the lead developer of the open-source Urban Analyst platform, which aims to "Analyse and compare cities across the world". See the pinned repositories below for some of the software that powers that platform.

What and how i code

Most of my code is bundled as R packages, with a lot of that written in C++ or C. I do everything in vim + tmux, via my dotfiles

Anything else?

I've got an intermittently updated blog, and make intermittent noises on twitter.

mark padgham's Projects

altdoc icon altdoc

Alternative to pkgdown to document packages

applicable icon applicable

Quantify extrapolation of new samples given a training set

arviz icon arviz

Exploratory analysis of Bayesian models with Python

atom4r icon atom4r

R package to read/write metadata in Atom XML format

available icon available

Check if a package name is available to use

base-image icon base-image

Docker image with R and rspm and some system libraries

bibtex-tools icon bibtex-tools

Scripts to do various useful tricks with tex and bibtex files

binary-tree icon binary-tree

Binary search tree for efficient extraction of nth element

blendr icon blendr

Blending a Probablilty Sample and a Non-Probability Sample in a Capture-Recapture Setting

blog-guidance icon blog-guidance

rOpenSci Blog Guidelines for Authors and Editors (bookdown::git_book)

bomrang icon bomrang

Fetch Australian Government Bureau of Meteorology Data using R

burrp icon burrp

:bookmark: Tools to Import and Process 'PortSwigger' 'Burp' Proxy Data

calcurser icon calcurser

Functions to use 'calcurse' as a general organising tool

changepoint icon changepoint

A place for the development version of the changepoint package on CRAN.

cloc icon cloc

R package to the perl cloc script (which counts blank lines, comment lines, and physical lines of source code in source files/trees/archives)

codemetar icon codemetar

an R package for generating and working with codemeta

concavetest icon concavetest

Benchmark 'js' and 'cpp' versions of concaveman algorithm

cov19-nrw icon cov19-nrw

Adaptation of Tim Churches COV19 analyses to North Rhein-Westphalia, Germany

covr icon covr

Test coverage reports for R

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