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Minimum protein length about cenote-taker2 HOT 2 OPEN

mtisza1 avatar mtisza1 commented on July 28, 2024
Minimum protein length

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Comments (2)

mtisza1 avatar mtisza1 commented on July 28, 2024

Hey Darren, thanks for opening this issue. I added an enhancement tag to it.

There is nothing in the code right now to do this. It's a feature that could be added without too much trouble, and I have plans to make updates this summer (but I can't promise anything).

For your purposes, is it important that the output of Cenote-Taker 2 never annotates ORFs below a minimum length? Or would you like to be able to edit .gbf files and regenerate .sqn files based on your edits?

Thanks,

Mike

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DarrenObbard avatar DarrenObbard commented on July 28, 2024

Editing post hoc would be fine. Do Genbank Still accept sqn? I thought one had to submit the annotation table? - it is mainly that I would want easy way of regenerating the tbl and .gb files

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