Comments (1)
Sorry that I overlooked this issue for so long.
We don't have any experiences with Ion Torrent files. As long as FASTA or FASTQ files contain DNA sequences (so letter A,C,G,T, N, a, c, t, g, n) they can be used with MetaCache.
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Related Issues (20)
- metacache-build-refseq gets killed at 46% every time i try to build the database HOT 2
- Problem building DB with metacache-build-refseq HOT 6
- Report MetaCache version HOT 1
- Interpreting abundance profile HOT 5
- Segmentation fault (core dumped) HOT 6
- Segmentation fault when using --lowest species HOT 3
- Database Build Files HOT 2
- Results Output Visualization HOT 1
- Building a custom DB HOT 2
- Merging results from querying partitioned database HOT 16
- Make throws the Invalid Option error if multiple macros are passed HOT 1
- Unranked targets when building custom DB HOT 5
- Compiling with uint64_t HOT 5
- Guidance for working with large reference data sets HOT 6
- GPU version on bioconda HOT 3
- Scientific notation in abundance file result in rounding errors HOT 5
- Using DB partition and MERGE does not match single DB abundance results
- Segmentation fault (core dump) issue on custom DB HOT 2
- Issues with partitioned DB and merging
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