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201603_bioinfohub_hpc

adelaide-recipes

awesome-r

A curated list of awesome R frameworks, packages and software.

bioinformatics-wiki

ACAD's Bioinformatics Wiki Pages

diatension

An awareness website on Diabetes & Hypertension

eager-gui

The EAGER Pipeline

gargammel

gargammel is an ancient DNA simulator

hmmer

Profile hidden Markov models for biological sequence analysis

hominid

Hominid: host-microbiome interaction identification

interproscan

intro-bash_2016_03_24

intro-ngs_2016-03-31

krona

Interactively explore metagenomes and more from a web browser.

laam_scripts4acad

Scripts and tools developed for ACAD work

machine-learning-links-and-lessons-learned

List of all the lessons learned, best practices, and links from my time studying machine learning

megan-ce

MEGAN Community Edition

metabenchmark

Repository for benchmark of metagenome tools

microbiomegwas

mixmir

A mixed linear model approach to small RNA motif discovery

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

ncbi-genome-download

Scripts to download genomes from the NCBI FTP servers

netdata

Real-time performance monitoring, done right!

paleomix

Pipelines and tools for the processing of ancient and modern HTS data.

phinch

Phinch is an open-source framework for visualizing biological data, funded by a grant from the Alfred P. Sloan foundation. This project represents an interdisciplinary collaboration between Pitch Interactive, a data visualization studio in Berkeley, CA, and biological researchers at UC Davis.

q2-alignment

Support for multiple sequence alignment in QIIME 2.

qiime2

It has begun...

scientific-python-workshop

Scientific Python Programming Workshop, April 2016 Australia

simwreck

This is simwreck

visr

Data visualisation, interactive data analysis, statistical programming