naotohori Goto Github PK

16s-central-folding

9fc

Fortranコンパイラを作ってみたい。

arena

azokinetics

blendscivis

fqcp

Fortran code of Quaternion Characteristic Polynomial (QCP) superposition method

illustrate

Biomolecular Illustration Tool

lakers

life-of-py

Watch out! Richard Parker is there. (These are all just for my personal use.)

lifeofpy

linearfold

The new source code of the LinearFold, linear-time prediction for RNA secondary structures

matisse

naclub

naotohori

Config files for my GitHub profile.

naotohori.github.io

notes

pca_imkl

Principal Component Analysis (PCA) using Intel Math Kernel Library

pops

POPS*: solvent accessible surface areas (SASAs) of proteins and nucleic acids

process-book

Unix系システムのプロセスについて日本語で解説しています

proteincollapsvis

Dynamic visualization of the collapsibility of proteins in PDB. See http://dx.doi.org/10.1039/C7SM00074J

rna_llps

code to perform coarse-grained simulations of RNA liquid-liquid phase separation

rnp32isgpu

sop-gpu

Software package for simulations of biomolecules on GPU.

tis2aa

Construct atomistic (AA) model from Three-Interaction-Site (TIS) coarse-grained model of RNA/DNA

toml-f

TOML parser implementation for data serialization and deserialization in Fortran

torchmd

End-To-End Molecular Dynamics (MD) Engine using PyTorch

vmd-scripts

VMD scripts