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Natalie Elphick's Projects

bioinfo-functions icon bioinfo-functions

A set of reusable functions for bioinformatics projects, organized by language and their associated package/module

cnv_facets icon cnv_facets

Somatic copy variant caller (CNV) for next generation sequencing

kb-helper icon kb-helper

Streamlines scSeq data alignment with kallisto

lohhla icon lohhla

Fork of https://bitbucket.org/mcgranahanlab/lohhla

motif-mark icon motif-mark

Bioinformatic command line utility to visualize protein binding domain motifs.

polysolver_v4_source icon polysolver_v4_source

Repo containing the source code from the sachet/polysolver:v4 docker image. For reference only.

purecn icon purecn

Copy number calling and variant classification using targeted short read sequencing

rticles icon rticles

LaTeX Journal Article Templates for R Markdown

seurat icon seurat

R toolkit for single cell genomics

texomer icon texomer

Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data

wind icon wind

weighted indexes for clustering evaluation

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