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Nico B.'s Projects

cellphy icon cellphy

CellPhy: accurate and fast probabilistic inference of single-cell phylogenies

lsf icon lsf

Snakemake profile for running jobs on an LSF cluster

monovar icon monovar

Single nucleotide variant (SNV) detection and genotyping algorithm for single-cell DNA sequencing data

orf_finder icon orf_finder

Read in a sequence in fasta format, find all orf's and blast the results (optional).

sccaller icon sccaller

Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data

shorah icon shorah

Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)

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