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arriba

Fast and accurate gene fusion detection from RNA-Seq data

autotimer

back_to_sequences

bcb731

Defense Against the Dark Arts

beetl

BEETL

bi-be-cs-183-2023

Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023

bioconda-recipes

Conda recipes for the bioconda channel.

biopython

Official git repository for Biopython (converted from CVS)

blast2bam

breakfast

Breakfast - a software for detecting genomic structural variants from DNA sequencing data

bus_notebooks_python

codac

Comprehensive Detection and Analysis of Chimeras

contrastive

Contrastive PCA

cookiecutter

cudamergesort

Highly parallel, GPU-accelerated hybrid mergesort with mmap'd IO

d3_reusable_charts

datahub

A centralized location for storing curated data ready for inclusion in cBioPortal.

deep-feature-selection

Python (PyTorch) realization of Deep Feature Selection (Model, Algorithm)

fastqpuri

fastq quality assessment and filtering tool

fastqtk

FASTQ lightweight tools

fcseqtk

Fork of SeqTK adapted for FusionCatcher

fqtools

Tools for processing fastq files

fusionannotator

FusionAnnotator source code

fusioncatcher

Finder of Somatic Fusion Genes in RNA-seq data

fusioninspector

FusionInspector code

fuzzion2

fuzzy fusion finder

gmusicapi

An unofficial client library for Google Music.

gwsocket

fast, standalone, language-agnostic WebSocket server RFC6455 compliant

harc

Fastq compression

hcc-conda-recipes

Read-only copy of the HCC conda recipes repo.