Comments (1)
Might be worth investigating the idea of the different libraries offering mocking APIs each, e.g. ARCtrl offering mocking API so we can have easier access to in-memory tests for Process graph parsing in this lib. This has a distinct advantage over a centralized mocking package, as the respective mocks are always needed in the libs for Unit testing and therefore more likely to keep up the pace with specs etc.
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Related Issues (20)
- Use new equals overrides for testing CvParam equality in ARCTokenizarion tests
- Transfer ArcGraph into ARCTokenization
- `Study.parseMetadataSheetfromFile` does not parse metadata sheet: says worksheet is not present HOT 4
- `Assay.parseMetadataSheetfromFile` does not parse metadata sheet: says worksheet is not present
- [BUG] Annotation table parsing can result in CvParam lists of incorrect length when parsing incorrect building blocks HOT 1
- [Discussion] AnnotationTable.TokenizedAnnotationTable HOT 4
- [Feature Request] Annotation Table Graph
- [Discussion] is it really necessary to nest static ontology terms HOT 2
- [BUG] Study structural ontology has incorrect ID links in some cases HOT 2
- [BUG] When parsing User Comments, the name of the comment (not the value!) gets lost
- Refactor FileSystem token-based metadata parsing from ValidationPackage POC into ARCTokenization
- [BUG] `ARCMock.AssayMetadataTokens` misses Assay Technology Type TAN HOT 1
- `ARCMock` does not allow adding of User Comments HOT 1
- ProcessGraph parsing function (Study & Assay) only works with full paths but a function for tokens (like those for metadata sheets) would be nice
- Feature Request - Enhanced Tokenization for Specific Folders and Files
- Add integration tests for parsing ISA files from tokens
- Add CodeGenerator for structural ontologies HOT 1
- Move ControlledVocabulary to own repo HOT 1
- Use OBO.NET.CodeGeneration for structural ontology generation
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